• Login
    Search 
    •   Athenaeum Home
    • BioMed Central Open Access Articles
    • Search
    •   Athenaeum Home
    • BioMed Central Open Access Articles
    • Search
    JavaScript is disabled for your browser. Some features of this site may not work without it.

    Search

    Show Advanced FiltersHide Advanced Filters

    Filters

    Use filters to refine the search results.

    Now showing items 1-10 of 18

    • Sort Options:
    • Relevance
    • Title Asc
    • Title Desc
    • Issue Date Asc
    • Issue Date Desc
    • Results Per Page:
    • 5
    • 10
    • 20
    • 40
    • 60
    • 80
    • 100
    Thumbnail

    A physical map of Brassica oleracea shows complexity of chromosomal changes following recursive paleopolyploidizations 

    Wang, Xiyin; Torres, Manuel J; Pierce, Gary; Lemke, Cornelia; Nelson, Lisa K; Yuksel, Bayram; Bowers, John E; Marler, Barry; Xiao, Yongli; Lin, Lifeng; Epps, Ethan; Sarazen, Heidi; Rogers, Carl; Karunakaran, Santhosh; Ingles, Jennifer; Giattina, Emily; Mun, Jeong-Hwan; Seol, Young-Joo; Park, Beom-Seok; Amasino, Richard M; Quiros, Carlos F; Osborn, Thomas C; Pires, J C; Town, Christopher; Paterson, Andrew H (2011-09-28)
    Abstract Background Evolution of the Brassica species has been recursively affected by polyploidy events, and comparison to their relative, Arabidopsis thaliana, provides means to explore their genomic complexity. ...
    Thumbnail

    Screening synteny blocks in pairwise genome comparisons through integer programming 

    Tang, Haibao; Lyons, Eric; Pedersen, Brent; Schnable, James C; Paterson, Andrew H; Freeling, Michael (2011-04-18)
    Abstract Background It is difficult to accurately interpret chromosomal correspondences such as true orthology and paralogy due to significant divergence of genomes from a common ancestor. Analyses are particularly ...
    Thumbnail

    Genome of the long-living sacred lotus (Nelumbo nucifera Gaertn.) 

    Ming, Ray; VanBuren, Robert; Liu, Yanling; Yang, Mei; Han, Yuepeng; Li, Lei-Ting; Zhang, Qiong; Kim, Min-Jeong; Schatz, Michael C; Campbell, Michael; Li, Jingping; Bowers, John E; Tang, Haibao; Lyons, Eric; Ferguson, Ann A; Narzisi, Giuseppe; Nelson, David R; Blaby-Haas, Crysten E; Gschwend, Andrea R; Jiao, Yuannian; Der, Joshua P; Zeng, Fanchang; Han, Jennifer; Min, Xiang J; Hudson, Karen A; Singh, Ratnesh; Grennan, Aleel K; Karpowicz, Steven J; Watling, Jennifer R; Ito, Kikukatsu; Robinson, Sharon A; Hudson, Matthew E; Yu, Qingyi; Mockler, Todd C; Carroll, Andrew; Zheng, Yun; Sunkar, Ramanjulu; Jia, Ruizong; Chen, Nancy; Arro, Jie; Wai, Ching M; Wafula, Eric; Spence, Ashley; Han, Yanni; Xu, Liming; Zhang, Jisen; Peery, Rhiannon; Haus, Miranda J; Xiong, Wenwei; Walsh, James A; Wu, Jun; Wang, Ming-Li; Zhu, Yun J; Paull, Robert E; Britt, Anne B; Du, Chunguang; Downie, Stephen R; Schuler, Mary A; Michael, Todd P; Long, Steve P; Ort, Donald R; William Schopf, J; Gang, David R; Jiang, Ning; Yandell, Mark; dePamphilis, Claude W; Merchant, Sabeeha S; Paterson, Andrew H; Buchanan, Bob B; Li, Shaohua; Shen-Miller, Jane (2013-05-10)
    Abstract Background Sacred lotus is a basal eudicot with agricultural, medicinal, cultural and religious importance. It was domesticated in Asia about 7,000 years ago, and cultivated for its rhizomes and seeds as a food ...
    Thumbnail

    Comparative genomic analysis of C4 photosynthetic pathway evolution in grasses 

    Wang, Xiyin; Gowik, Udo; Tang, Haibao; Bowers, John E; Westhoff, Peter; Paterson, Andrew H (2009-06-23)
    Abstract Background Sorghum is the first C4 plant and the second grass with a full genome sequence available. This makes it possible ...
    Thumbnail

    Complexity of genome evolution by segmental rearrangement in Brassica rapa revealed by sequence-level analysis 

    Trick, Martin; Kwon, Soo-Jin; Choi, Su R; Fraser, Fiona; Soumpourou, Eleni; Drou, Nizar; Wang, Zhi; Lee, Seo Y; Yang, Tae-Jin; Mun, Jeong-Hwan; Paterson, Andrew H; Town, Christopher D; Pires, J Chris; Pyo Lim, Yong; Park, Beom-Seok; Bancroft, Ian (2009-11-18)
    Abstract Background The Brassica species, related to Arabidopsis thaliana, include an important group of crops and represent an ...
    Thumbnail

    SNPhylo: a pipeline to construct a phylogenetic tree from huge SNP data 

    Lee, Tae-Ho; Guo, Hui; Wang, Xiyin; Kim, Changsoo; Paterson, Andrew H (2014-02-26)
    Abstract Background Phylogenetic trees are widely used for genetic and evolutionary studies in various organisms. Advanced sequencing technology has dramatically enriched data available for ...
    Thumbnail

    Sequencing of transcriptomes from two Miscanthus species reveals functional specificity in rhizomes, and clarifies evolutionary relationships 

    Kim, Changsoo; Lee, Tae-Ho; Guo, Hui; Chung, Sung J; Paterson, Andrew H; Kim, Do-Soon; Lee, Geung-Joo (2014-05-18)
    Abstract Background Miscanthus is a promising biomass crop for temperate regions. Despite the increasing interest in this plant, limited sequence information has constrained research into ...
    Thumbnail

    Transcriptome and methylome profiling reveals relics of genome dominance in the mesopolyploid Brassica oleracea 

    Parkin, Isobel A; Koh, Chushin; Tang, Haibao; Robinson, Stephen J; Kagale, Sateesh; Clarke, Wayne E; Town, Chris D; Nixon, John; Krishnakumar, Vivek; Bidwell, Shelby L; Denoeud, France; Belcram, Harry; Links, Matthew G; Just, Jérémy; Clarke, Carling; Bender, Tricia; Huebert, Terry; Mason, Annaliese S; Pires, J C; Barker, Guy; Moore, Jonathan; Walley, Peter G; Manoli, Sahana; Batley, Jacqueline; Edwards, David; Nelson, Matthew N; Wang, Xiyin; Paterson, Andrew H; King, Graham; Bancroft, Ian; Chalhoub, Boulos; Sharpe, Andrew G (2014-06-10)
    Abstract Background Brassica oleracea is a valuable vegetable species that has contributed to human health and nutrition for hundreds of years and comprises ...
    Thumbnail

    Genetic analysis of inflorescence and plant height components in sorghum (Panicoidae) and comparative genetics with rice (Oryzoidae) 

    Zhang, Dong; Kong, Wenqian; Robertson, Jon; Goff, Valorie H; Epps, Ethan; Kerr, Alexandra; Mills, Gabriel; Cromwell, Jay; Lugin, Yelena; Phillips, Christine; Paterson, Andrew H (2015-04-19)
    Abstract Background Domestication has played an important role in shaping characteristics of the inflorescence and plant height in cultivated cereals. Taking advantage of ...
    Thumbnail

    A physical map for the Amborella trichopoda genome sheds light on the evolution of angiosperm genome structure 

    Zuccolo, Andrea; Bowers, John E; Estill, James C; Xiong, Zhiyong; Luo, Meizhong; Sebastian, Aswathy; Goicoechea, José L; Collura, Kristi; Yu, Yeisoo; Jiao, Yuannian; Duarte, Jill; Tang, Haibao; Ayyampalayam, Saravanaraj; Rounsley, Steve; Kudrna, Dave; Paterson, Andrew H; Pires, J C; Chanderbali, Andre; Soltis, Douglas E; Chamala, Srikar; Barbazuk, Brad; Soltis, Pamela S; Albert, Victor A; Ma, Hong; Mandoli, Dina; Banks, Jody; Carlson, John E; Tomkins, Jeffrey; dePamphilis, Claude W; Wing, Rod A; Leebens-Mack, Jim (2011-05-27)
    Abstract Background Recent phylogenetic analyses have identified Amborella trichopoda, an understory tree species endemic to the forests of New Caledonia, as sister to a clade including all other known flowering plant ...
    • 1
    • 2

    About Athenaeum | Contact Us | Send Feedback
     

     

    Browse

    All of AthenaeumCommunities & CollectionsBy Issue DateAuthorsTitlesSubjectsThis CommunityBy Issue DateAuthorsTitlesSubjects

    My Account

    LoginRegister

    Discover

    Author
    Paterson, Andrew H (18)
    Tang, Haibao (8)Bowers, John E (6)Wang, Xiyin (6)Kim, Changsoo (4)Ming, Ray (4)Pires, J C (4)Yu, Qingyi (4)Bancroft, Ian (3)Epps, Ethan (3)... View MoreDate Issued2014 (5)2009 (3)2011 (3)2010 (2)2012 (2)2013 (2)2015 (1)Has File(s)
    Yes (18)

    About Athenaeum | Contact Us | Send Feedback