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SNPhylo: a pipeline to construct a phylogenetic tree from huge SNP data
(2014-02-26)
Abstract
Background
Phylogenetic trees are widely used for genetic and evolutionary studies in various organisms. Advanced sequencing technology has dramatically enriched data available for ...
Sequencing of transcriptomes from two Miscanthus species reveals functional specificity in rhizomes, and clarifies evolutionary relationships
(2014-05-18)
Abstract
Background
Miscanthus is a promising biomass crop for temperate regions. Despite the increasing interest in this plant, limited sequence information has constrained research into ...
Building the sugarcane genome for biotechnology and identifying evolutionary trends
(2014-06-30)
Abstract
Background
Sugarcane is the source of sugar in all tropical and subtropical countries and is becoming increasingly important for bio-based fuels. However, its large (10 Gb), ...
A draft physical map of a D-genome cotton species (Gossypium raimondii)
(2010-06-22)
Abstract
Background
Genetically anchored physical maps of large eukaryotic genomes have proven useful both for their intrinsic merit and as an adjunct to genome sequencing. Cultivated tetraploid cottons, Gossypium ...